PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.05G108700.1.p
Common NameGLYMA_05G108700
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family NAC
Protein Properties Length: 213aa    MW: 24220.5 Da    PI: 8.7089
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.05G108700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM35.92.2e-11189833111
                  NAM  33 vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWk...atgkdkevlskkgelvglkktLvfykg 111
                          +i+   +i++++P++L   v+ +  + +fF+  +k+y+tg+rk+r++++       +t  +k+v++ +g+++g+kk+Lv ++ 
  Glyma.05G108700.1.p  18 AIEGEdGICYTHPEKLL-GVTRDGLSKHFFHGPSKAYTTGTRKRRKIQNECDLqggETLWHKPVMV-NGKQKGCKKILVMHQY 98 
                          3666547*********6.666667799******************866443330114444799999.999*********9952 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.88E-148118IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
MEAKNMKSHP LIDEFIPAIE GEDGICYTHP EKLLGVTRDG LSKHFFHGPS KAYTTGTRKR  60
RKIQNECDLQ GGETLWHKPV MVNGKQKGCK KILVMHQYHL GQHEEEKGEV MVSKIFYQTQ  120
PRQCNWSNKS AITSEGSGEP NNNSTGRRDS GSRSCSSKEI VTHRYEMSVV VGVPPMTSFT  180
THHPLDIQQL KLDHFSFIPF KKTFDEVYIH YN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150443e-85AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006583563.11e-129PREDICTED: NAC domain-containing protein 73
RefseqXP_006583564.11e-129PREDICTED: NAC domain-containing protein 73
RefseqXP_006583566.11e-129PREDICTED: NAC domain-containing protein 73
SwissprotO494594e-51NAC73_ARATH; NAC domain-containing protein 73
TrEMBLA0A0R0K0J31e-160A0A0R0K0J3_SOYBN; Uncharacterized protein
TrEMBLK7KPJ21e-160K7KPJ2_SOYBN; Uncharacterized protein
STRINGGLYMA05G22985.11e-160(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5251585
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.12e-69NAC domain containing protein 75